OrchidBase 5.0
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Orchid in Wikipedia
Development and Goals
Database Statistics
Characteristics of orchid species
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Orchid Genome (
New!
)
Phalaenopsis equestris
Dendrobium catenatum
Apostasia shenzhenica
Vanilla pompona
Vanilla shenzhenica
Platanthera guangdongensis
Platanthera zijinensis
Lusidua discolor
Transcriptome
Phalaenopsis Transcriptome
Orchidaceae Floral Transcriptome
Tools (
New!
)
Download (
New!
)
Help
Program Option
Program name:
EXPECT threshold:
# of Alignment:
blastn
tblastx
tblastn
10.0
1.0
0.1
0.01
0.001
0.0001
0.00001
0.000001
0.0000001
200
250
300
350
Alignment View:
Database:
Pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
XML Blast output
tabular
abular with comment lines
Text ASN.1
Binary ASN.1
Comma-separated values
Phalaenopsis_cds
Phalaenopsis_Scaffold
Scoring Parameters
Match/Mismatch Scores
GapOpen/GapExtend
Filter
1
2
4
/
-1
-2
-3
-4
-5
-1
-2
-3
-4
-5
/
-1
-2
-3
Low complexity regions
Enter Query Sequence: